Module 3: Genome Assembly

Lessons:

• Lesson 1: Assembly Algorithms
  • 3.1 Instructions
  • 3.1 Resources
  • 3.1 Lesson
    • Learning Objectives
    • Vocabulary
    • Learning Material
  • 3.1 Lab Exercises
    • Overview
    • Task A
    • Mastering Content
• Lesson 2: Building a Draft Genome
  • 3.2 Instructions
  • 3.2 Resources
  • 3.2 Lesson
    • Learning Objectives
    • Vocabulary
    • Learning Material
  • 3.2 Lab Exercises
    • Overview
    • Task A:
    • Mastering Content
    • So I have an Assembly… Now What?
    • Assessing haplotypes
• Lesson 3: Scaffolding Algorithms
  • 3.3 Instructions
  • 3.3 Resources
  • 3.3 Lesson
    • Learning Objectives
    • Vocabulary
    • Learning Material
  • 3.3 Lab Exercises
    • Overview
    • Task A
• Lesson 4: Interacting with Hi-C Maps
  • 3.4 Instructions
  • 3.4 Resources
  • 3.4 Lesson
    • Learning Objectives
    • Vocabulary
    • Learning Material
  • 3.4 Lab Exercises
    • Overview
    • Task A
    • Task B
    • Mastering Content
    • Finding mis-assemblies
• Lesson 5: Assessing Completeness
  • 3.5 Instructions
  • 3.5 Resources
  • 3.5 Lesson
    • Learning Objectives
    • Vocabulary
    • Learning Material
  • 3.5 Lab Exercises
    • Task A
    • Task B
    • Mastering Content