American Campus Tree Genomes
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Contents:

  • Introduction
  • Course Setup
  • Module 1: Plant Genomics
  • Module 2: Planning a Genome Project
  • Module 3: Genome Assembly
  • Module 4: Genome Annotation
  • Module 5: Comparative Genomics
    • Lesson 1: Identifying Synteny
    • Lesson 2: Building Gene Families
    • Lesson 3: Estimating a Gene Tree
    • Lesson 4: Aligning Resequence Data
    • Lesson 5: Variant Calling
  • Module 6: Publishing Scientific Results
American Campus Tree Genomes
  • Module 5: Comparative Genomics
  • Edit on GitHub

Module 5: Comparative Genomics

Lessons:

  • Lesson 1: Identifying Synteny
    • 5.1 Instructions
    • 5.1 Resources
    • 5.1 Lesson
      • Learning Objectives
      • Vocabulary
      • Learning Material
    • 5.1 Lab Exercises
  • Lesson 2: Building Gene Families
    • 5.2 Instructions
    • 5.2 Resources
    • 5.2 Lesson
      • Learning Objectives
      • Vocabulary
      • Learning Material
    • 5.2 Lab Exercises
  • Lesson 3: Estimating a Gene Tree
    • 5.3 Instructions
    • 5.3 Resources
    • 5.3 Lesson
      • Learning Objectives
      • Vocabulary
      • Learning Material
    • 5.3 Lab Exercises
  • Lesson 4: Aligning Resequence Data
    • 5.4 Instructions
    • 5.4 Resources
    • 5.4 Lesson
      • Learning Objectives
      • Vocabulary
      • Learning Material
    • 5.4 Lab Exercises
  • Lesson 5: Variant Calling
    • 5.5 Instructions
    • 5.5 Resources
    • 5.5 Lesson
      • Learning Objectives
      • Vocabulary
      • Learning Material
    • 5.5 Lab Exercises
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