American Campus Tree Genomes
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Contents:
Introduction
Course Setup
Module 1: Plant Genomics
Module 2: Planning a Genome Project
Module 3: Genome Assembly
Lesson 1: Assembly Algorithms
Lesson 2: Building a Draft Genome
Lesson 3: Scaffolding Algorithms
Lesson 4: Interacting with Hi-C Maps
3.4 Instructions
3.4 Resources
3.4 Lesson
3.4 Lab Exercises
Lesson 5: Assessing Completeness
Module 4: Genome Annotation
Module 5: Comparative Genomics
Module 6: Publishing Scientific Results
American Campus Tree Genomes
Module 3: Genome Assembly
Lesson 4: Interacting with Hi-C Maps
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Lesson 4: Interacting with Hi-C Maps
Learning Material:
3.4 Instructions
3.4 Resources
3.4 Lesson
Learning Objectives
Vocabulary
Learning Material
3.4 Lab Exercises
Overview
Task A
Step 1: Working with Hi-C maps
Step 2: Load a Hi-C contact matrix
Task B
Mastering Content
Finding mis-assemblies