American Campus Tree Genomes
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Contents:
Introduction
Course Setup
Module 1: Plant Genomics
Lesson 1: Introduction to Plant Genomics
1.1 Instructions
1.1 Resources
1.1 Lesson
1.1 Lab Exercises
Lesson 2: Introduction to Biological Computing
Lesson 3: Compute Clusters and Programming Languages
Lesson 4: Writing a Scientific Manuscript
Module 2: Planning a Genome Project
Module 3: Genome Assembly
Module 4: Genome Annotation
Module 5: Comparative Genomics
Module 6: Publishing Scientific Results
American Campus Tree Genomes
Module 1: Plant Genomics
Lesson 1: Introduction to Plant Genomics
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Lesson 1: Introduction to Plant Genomics
Learning Material:
1.1 Instructions
1.1 Resources
1.1 Lesson
Learning Objectives
Vocabulary
Learning Material
1.1 Lab Exercises
Overview
Task A: Get comfortable on the command line
Step 1. Where am I?
Step 2. Make a new directory for this lab
Task B: Download the
Arabidopsis thaliana
genome from TAIR
Step 1. Download the genome for
Arabidopsis thaliana
Step 2. Let’s see what the genome looks like
Step 3. View gene annotation sequences in a FASTA file
Mastering Content
Step 1
Step 2
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